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| Author | Coles, V.J.; Stukel, M.R.; Brooks, M.T.; Burd, A.; Crump, B.C.; Moran, M.A.; Paul, J.H.; Satinsky, B.M.; Yager, P.L.; Zielinski, B.L.; Hood, R.R. | ||||
| Title | Ocean biogeochemistry modeled with emergent trait-based genomics | Type | $loc['typeJournal Article'] | ||
| Year | 2017 | Publication | Science (New York, N.Y.) | Abbreviated Journal | Science |
| Volume | 358 | Issue | 6367 | Pages | 1149-1154 |
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| Address | Horn Point Laboratory, University of Maryland Center for Environmental Science (UMCES), Post Office Box 775, Cambridge, MD 21613, USA | ||||
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| Publisher | Place of Publication | Editor | |||
| Language | English | Summary Language | Original Title | ||
| Series Editor | Series Title | Abbreviated Series Title | |||
| Series Volume | Series Issue | Edition | |||
| ISSN | 0036-8075 | ISBN | Medium | ||
| Area | Expedition | Conference | |||
| Funding | PMID:29191900 | Approved | $loc['no'] | ||
| Call Number | COAPS @ mfield @ | Serial | 552 | ||
| Permanent link to this record | |||||
| Author | Adams, D.K.; McGillicuddy, D.J.J.; Zamudio, L.; Thurnherr, A.M.; Liang, X.; Rouxel, O.; German, C.R.; Mullineaux, L.S. | ||||
| Title | Surface-generated mesoscale eddies transport deep-sea products from hydrothermal vents | Type | $loc['typeJournal Article'] | ||
| Year | 2011 | Publication | Science (New York, N.Y.) | Abbreviated Journal | Science |
| Volume | 332 | Issue | 6029 | Pages | 580-583 |
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| Abstract | Atmospheric forcing, which is known to have a strong influence on surface ocean dynamics and production, is typically not considered in studies of the deep sea. Our observations and models demonstrate an unexpected influence of surface-generated mesoscale eddies in the transport of hydrothermal vent efflux and of vent larvae away from the northern East Pacific Rise. Transport by these deep-reaching eddies provides a mechanism for spreading the hydrothermal chemical and heat flux into the deep-ocean interior and for dispersing propagules hundreds of kilometers between isolated and ephemeral communities. Because the eddies interacting with the East Pacific Rise are formed seasonally and are sensitive to phenomena such as El Nino, they have the potential to introduce seasonal to interannual atmospheric variations into the deep sea. | ||||
| Address | Woods Hole Oceanographic Institution, Woods Hole, MA 02543, USA. dadams@whoi.edu | ||||
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| Publisher | Place of Publication | Editor | |||
| Language | English | Summary Language | Original Title | ||
| Series Editor | Series Title | Abbreviated Series Title | |||
| Series Volume | Series Issue | Edition | |||
| ISSN | 0036-8075 | ISBN | Medium | ||
| Area | Expedition | Conference | |||
| Funding | PMID:21527710 | Approved | $loc['no'] | ||
| Call Number | COAPS @ mfield @ | Serial | 307 | ||
| Permanent link to this record | |||||
| Author | Coles, V.J.; Stukel, M.R.; Brooks, M.T.; Burd, A.; Crump, B.C.; Moran, M.A.; Paul, J.H.; Satinsky, B.M.; Yager, P.L.; Zielinski, B.L.; Hood, R.R. | ||||
| Title | Ocean biogeochemistry modeled with emergent trait-based genomics | Type | $loc['typeJournal Article'] | ||
| Year | 2017 | Publication | Science (New York, N.Y.) | Abbreviated Journal | Science |
| Volume | 358 | Issue | 6367 | Pages | 1149-1154 |
| Keywords | Atlantic Ocean; Biochemical Phenomena/genetics; Metabolic Networks and Pathways/*genetics; Metagenome; *Metagenomics; Microbial Consortia/*genetics; Models, Biological; Seawater/*microbiology; Transcriptome | ||||
| Abstract | Marine ecosystem models have advanced to incorporate metabolic pathways discovered with genomic sequencing, but direct comparisons between models and “omics” data are lacking. We developed a model that directly simulates metagenomes and metatranscriptomes for comparison with observations. Model microbes were randomly assigned genes for specialized functions, and communities of 68 species were simulated in the Atlantic Ocean. Unfit organisms were replaced, and the model self-organized to develop community genomes and transcriptomes. Emergent communities from simulations that were initialized with different cohorts of randomly generated microbes all produced realistic vertical and horizontal ocean nutrient, genome, and transcriptome gradients. Thus, the library of gene functions available to the community, rather than the distribution of functions among specific organisms, drove community assembly and biogeochemical gradients in the model ocean. | ||||
| Address | Horn Point Laboratory, University of Maryland Center for Environmental Science (UMCES), Post Office Box 775, Cambridge, MD 21613, USA | ||||
| Corporate Author | Thesis | ||||
| Publisher | Place of Publication | Editor | |||
| Language | English | Summary Language | Original Title | ||
| Series Editor | Series Title | Abbreviated Series Title | |||
| Series Volume | Series Issue | Edition | |||
| ISSN | 0036-8075 | ISBN | Medium | ||
| Area | Expedition | Conference | |||
| Funding | strtoupper('2').strtolower('9191900') | Approved | $loc['no'] | ||
| Call Number | COAPS @ rl18 @ | Serial | 989 | ||
| Permanent link to this record | |||||
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