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Author Coles, V.J.; Stukel, M.R.; Brooks, M.T.; Burd, A.; Crump, B.C.; Moran, M.A.; Paul, J.H.; Satinsky, B.M.; Yager, P.L.; Zielinski, B.L.; Hood, R.R.
Title Ocean biogeochemistry modeled with emergent trait-based genomics Type $loc['typeJournal Article']
Year 2017 Publication Science (New York, N.Y.) Abbreviated Journal Science
Volume 358 Issue 6367 Pages 1149-1154
Keywords Atlantic Ocean; Biochemical Phenomena/genetics; Metabolic Networks and Pathways/*genetics; Metagenome; *Metagenomics; Microbial Consortia/*genetics; Models, Biological; Seawater/*microbiology; Transcriptome
Abstract Marine ecosystem models have advanced to incorporate metabolic pathways discovered with genomic sequencing, but direct comparisons between models and “omics” data are lacking. We developed a model that directly simulates metagenomes and metatranscriptomes for comparison with observations. Model microbes were randomly assigned genes for specialized functions, and communities of 68 species were simulated in the Atlantic Ocean. Unfit organisms were replaced, and the model self-organized to develop community genomes and transcriptomes. Emergent communities from simulations that were initialized with different cohorts of randomly generated microbes all produced realistic vertical and horizontal ocean nutrient, genome, and transcriptome gradients. Thus, the library of gene functions available to the community, rather than the distribution of functions among specific organisms, drove community assembly and biogeochemical gradients in the model ocean.
Address Horn Point Laboratory, University of Maryland Center for Environmental Science (UMCES), Post Office Box 775, Cambridge, MD 21613, USA
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Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0036-8075 ISBN Medium
Area Expedition Conference
Funding strtoupper('2').strtolower('9191900') Approved $loc['no']
Call Number COAPS @ rl18 @ Serial 989
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Author Shi, Q.
Title Coupling ocean currents and waves with wind stress over the Gulf Stream Type $loc['typeManuscript']
Year 2017 Publication Abbreviated Journal
Volume Issue Pages
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Abstract
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Corporate Author Thesis $loc['Ph.D. thesis']
Publisher Florida State University Place of Publication Tallahassee, FL Editor
Language Summary Language Original Title
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ISSN ISBN Medium
Area Expedition Conference
Funding Approved $loc['no']
Call Number COAPS @ mfield @ Serial 359
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Author Sun, S.
Title Dynamics-based analysis of tropical waves Type $loc['typeManuscript']
Year 2017 Publication Abbreviated Journal
Volume Issue Pages
Keywords
Abstract
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Corporate Author Thesis $loc['Ph.D. thesis']
Publisher Florida State University Place of Publication Tallahassee, FL Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
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ISSN ISBN Medium
Area Expedition Conference
Funding Approved $loc['no']
Call Number COAPS @ mfield @ Serial 549
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Author Maksimova, E.V.
Title On the observed synoptic signal in the Mississippi-Alabama slope flow Type $loc['typeJournal Article']
Year 2017 Publication Journal of Geophysical Research: Oceans Abbreviated Journal J. Geophys. Res. Oceans
Volume 122 Issue 1 Pages 185-192
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Address
Corporate Author Thesis
Publisher Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 2169-9275 ISBN Medium
Area Expedition Conference
Funding Approved $loc['no']
Call Number COAPS @ mfield @ Serial 26
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Author Savage, A.C.; Arbic, B.K.; Richman, J.G.; Shriver, J.F.; Alford, M.H.; Buijsman, M.C.; Thomas Farrar, J.; Sharma, H.; Voet, G.; Wallcraft, A.J.; Zamudio, L.
Title Frequency content of sea surface height variability from internal gravity waves to mesoscale eddies Type $loc['typeJournal Article']
Year 2017 Publication Journal of Geophysical Research: Oceans Abbreviated Journal J. Geophys. Res. Oceans
Volume 122 Issue 3 Pages 2519-2538
Keywords internal gravity waves; internal tides; spectral density
Abstract
Address
Corporate Author Thesis
Publisher Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 2169-9275 ISBN Medium
Area Expedition Conference
Funding Approved $loc['no']
Call Number COAPS @ mfield @ Serial 14
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Author Dukhovskoy, D.S.; Bourassa, M.A.; Petersen, G.N.; Steffen, J.
Title Comparison of the ocean surface vector winds from atmospheric reanalysis and scatterometer-based wind products over the Nordic Seas and the northern North Atlantic and their application for ocean modeling Type $loc['typeJournal Article']
Year 2017 Publication Journal of Geophysical Research: Oceans Abbreviated Journal J. Geophys. Res. Oceans
Volume 122 Issue 3 Pages 1943-1973
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Abstract
Address
Corporate Author Thesis
Publisher Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 2169-9275 ISBN Medium
Area Expedition Conference
Funding Approved $loc['no']
Call Number COAPS @ mfield @ Serial 25
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Author Shin, D.W.; Baigorria, G.A.; Romero, C.C.; Cocke, S.; Oh, J.-H.; Kim, B.-M.
Title Assessing crop yield simulations driven by the NARCCAP regional climate models in the southeast United States Type $loc['typeJournal Article']
Year 2017 Publication Journal of Geophysical Research: Atmospheres Abbreviated Journal J. Geophys. Res. Atmos.
Volume 122 Issue 5 Pages 2549-2558
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Corporate Author Thesis
Publisher Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 2169897X ISBN Medium
Area Expedition Conference
Funding Approved $loc['no']
Call Number COAPS @ mfield @ Serial 28
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Author Stukel, M.R.; Ducklow, H.W.
Title Stirring Up the Biological Pump: Vertical Mixing and Carbon Export in the Southern Ocean Type $loc['typeJournal Article']
Year 2017 Publication Global Biogeochemical Cycles Abbreviated Journal Global Biogeochem. Cycles
Volume 31 Issue 9 Pages 1420-1434
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Abstract
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Publisher Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0886-6236 ISBN Medium
Area Expedition Conference
Funding Approved $loc['no']
Call Number COAPS @ mfield @ Serial 361
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Author Savage, A.C.; Arbic, B.K.; Alford, M.H.; Ansong, J.K.; Farrar, J.T.; Menemenlis, D.; O'Rourke, A.K.; Richman, J.G.; Shriver, J.F.; Voet, G.; Wallcraft, A.J.; Zamudio, L.
Title Spectral decomposition of internal gravity wave sea surface height in global models Type $loc['typeJournal Article']
Year 2017 Publication Journal of Geophysical Research: Oceans Abbreviated Journal J. Geophys. Res. Oceans
Volume 122 Issue 10 Pages 7803-7821
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Abstract
Address
Corporate Author Thesis
Publisher Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 2169-9275 ISBN Medium
Area Expedition Conference
Funding Approved $loc['no']
Call Number COAPS @ mfield @ Serial 372
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Author Savage, A.C.; Arbic, B.K.; Alford, M.H.; Ansong, J.K.; Farrar, J.T.; Menemenlis, D.; O'Rourke, A.K.; Richman, J.G.; Shriver, J.F.; Voet, G.; Wallcraft, A.J.; Zamudio, L.
Title Spectral decomposition of internal gravity wave sea surface height in global models: INTERNAL GRAVITY WAVE SEA SURFACE HEIGHT Type $loc['typeJournal Article']
Year 2017 Publication Journal of Geophysical Research: Oceans Abbreviated Journal J. Geophys. Res. Oceans
Volume 122 Issue 10 Pages 7803-7821
Keywords high-frequency motions; atmospheric pressure; dynamic height
Abstract Two global ocean models ranging in horizontal resolution from 1/128 to 1/488 are used to study the space and time scales of sea surface height (SSH) signals associated with internal gravity waves (IGWs). Frequency-horizontal wavenumber SSH spectral densities are computed over seven regions of the world ocean from two simulations of the HYbrid Coordinate Ocean Model (HYCOM) and three simulations of the Massachusetts Institute of Technology general circulation model (MITgcm). High wavenumber, high-frequency SSH variance follows the predicted IGW linear dispersion curves. The realism of high-frequency motions (>0:87 cpd) in the models is tested through comparison of the frequency spectral density of dynamic height variance computed from the highest-resolution runs of each model (1/258 HYCOM and 1/488 MITgcm) with dynamic height variance frequency spectral density computed from nine in situ profiling instruments. These high-frequency motions are of particular interest because of their contributions to the small-scale SSH variability that will be observed on a global scale in the upcoming Surface Water and Ocean Topography (SWOT) satellite altimetry mission. The variance at supertidal frequencies can be comparable to the tidal and low-frequency variance for high wavenumbers (length scales smaller than 50 km), especially in the higher-resolution simulations. In the highest-resolution simulations, the high-frequency variance can be greater than the low-frequency variance at these scales.
Address
Corporate Author Thesis
Publisher Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 2169-9275 ISBN Medium
Area Expedition Conference
Funding Approved $loc['no']
Call Number COAPS @ rl18 @ Serial 993
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