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Author Huang, T.; Armstrong, E.M.; Bourassa, M.A.; Cram, T.A.; Elya, J.; Greguska, F.; Jacob, J.C.; Ji, Z.; Jiang, Y.; Li, Y.; Quach, N.T.; McGibbney, L.J.; Smith, S.R.; Wilson, B.D.; Worley S.J.; Yang, C. url  doi
openurl 
  Title An Integrated Data Analytics Platform Type $loc['typeJournal Article']
  Year 2019 Publication Marine Science Abbreviated Journal Mar. Sci.  
  Volume 6 Issue Pages  
  Keywords big data, Cloud computing, Ocean science, data analysis, Matchup, anomaly detection, open source  
  Abstract An Integrated Science Data Analytics Platform is an environment that enables the confluence of resources for scientific investigation. It harmonizes data, tools and computational resources to enable the research community to focus on the investigation rather than spending time on security, data preparation, management, etc. OceanWorks is a NASA technology integration project to establish a cloud-based Integrated Ocean Science Data Analytics Platform for big ocean science at NASA�s Physical Oceanography Distributed Active Archive Center (PO.DAAC) for big ocean science. It focuses on advancement and maturity by bringing together several NASA open-source, big data projects for parallel analytics, anomaly detection, in situ to satellite data matchup, quality-screened data subsetting, search relevancy, and data discovery.

Our communities are relying on data available through distributed data centers to conduct their research. In typical investigations, scientists would (1) search for data, (2) evaluate the relevance of that data, (3) download it, and (4) then apply algorithms to identify trends, anomalies, or other attributes of the data. Such a workflow cannot scale if the research involves a massive amount of data or multi-variate measurements. With the upcoming NASA Surface Water and Ocean Topography (SWOT) mission expected to produce over 20PB of observational data during its 3-year nominal mission, the volume of data will challenge all existing Earth Science data archival, distribution and analysis paradigms. This paper discusses how OceanWorks enhances the analysis of physical ocean data where the computation is done on an elastic cloud platform next to the archive to deliver fast, web-accessible services for working with oceanographic measurements.
 
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  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN ISBN Medium  
  Area Expedition Conference  
  Funding Approved $loc['no']  
  Call Number COAPS @ user @ Serial 1038  
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Author Jackson, L.C.; Dubois, C.; Forget, G.; Haines, K.; Harrison, M.; Iovino, D.; Köhl, A.; Mignac, D.; Masina, S.; Peterson, K.A.; Piecuch, C.G.; Roberts, C.D.; Robson, J.; Storto, A.; Toyoda, T.; Valdivieso, M.; Wilson, C.; Wang, Y.; Zuo, H. url  doi
openurl 
  Title The Mean State and Variability of the North Atlantic Circulation: A Perspective From Ocean Reanalyses Type $loc['typeJournal Article']
  Year 2019 Publication Journal of Geophysical Research: Oceans Abbreviated Journal J. Geophys. Res. Oceans  
  Volume 124 Issue 12 Pages 8969-9003  
  Keywords  
  Abstract The transfer of Indian Ocean thermocline and intermediate waters into the South Atlantic via the Agulhas leakage is generally believed to be primarily accomplished through mesoscale eddy processes, essentially anticyclones known as Agulhas Rings. Here we take advantage of a recent eddy tracking algorithm and Argo float profiles to study the evolution and the thermohaline structure of one of these eddies over the course of 1.5 years (May 2013–November 2014). We found that during this period the ring evolved according to two different phases: During the first one, taking place in winter, the mixing layer in the eddy deepened significantly. During the second phase, the eddy subsided below the upper warmer layer of the South Atlantic subtropical gyre while propagating west. The separation of this eddy from the sea surface could explain the decrease in its surface signature in satellite altimetry maps, suggesting that such changes are not due to eddy dissipation processes. It is a very large eddy (7.1×1013 m3 in volume), extending, after subduction, from a depth of 200–1,200 m and characterized by two mode water cores. The two mode water cores represent the largest eddy heat and salt anomalies when compared with the surrounding. In terms of its impact over 1 year, the north‐westward propagation of this long‐lived anticyclone induces a transport of 2.2 Sv of water, 0.008 PW of heat, and 2.2×105 kg s−1 of salt. These results confirm that Agulhas Rings play a very important role in the Indo‐Atlantic interocean exchange of heat and salt.  
  Address  
  Corporate Author Thesis  
  Publisher Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 2169-9275 ISBN Medium  
  Area Expedition Conference  
  Funding Approved $loc['no']  
  Call Number COAPS @ user @ Serial 1080  
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Author Jacob, J. C.; Armstrong, E. M.; Bourassa, M. A.; Cram, T.; Elya, J. L.; Greguska, F. R., III; Huang, T.; Ji, Z.; Jiang, Y.; Li, Y.; McGibbney, L. J.; Quach, N.; Smith, S. R.; Tsontos, V. M.; Wilson, B. D.; Worley, S. J.; Yang, C. P. url  openurl
  Title OceanWorks: Enabling Interactive Oceanographic Analysis in the Cloud with Multivariate Data Type $loc['typeAbstract']
  Year 2018 Publication American Geophysical Union Abbreviated Journal AGU  
  Volume Fall Meeting Issue Pages  
  Keywords 910 Data assimilation, integration and fusion, INFORMATICSDE: 1916 Data and information discovery, INFORMATICSDE: 1926 Geospatial, INFORMATICSDE: 1942 Machine learning, INFORMATICS  
  Abstract NASA's Advanced Information System Technology (AIST) Program sponsors the OceanWorks project to establish an integrated data analytics center at the Physical Oceanography Distributed Active Archive Center (PO.DAAC). OceanWorks provides a series of interoperable capabilities that are essential for cloud-scale oceanographic research. These include big data analytics, data search with subsecond response, intelligent ranking of search results, subsetting based on data quality metrics, and rapid spatiotemporal matchup of satellite measurements with distributed in situ data. The software behind OceanWorks is being developed as an open source project in the Apache Incubator Science Data Analytics Platform (SDAP – http://sdap.apache.org). In this presentation we describe how OceanWorks enables efficient, scalable, interactive and interdisciplinary oceanographic analysis with multivariate data.

Interactivity is enabled by a number of SDAP features. First, SDAP provides Representational State Transfer (REST) interfaces to a number of built-in cloud analytics to compute time series, time-averaged maps, correlation maps, climatological maps, Hovmöller maps, and more. To access these, users simply navigate to a properly constructed parameterized URL in their web browser or issue web services calls in a variety of programming languages or in a Jupyter notebook. Alternatively, Python clients can make function calls via the NEXUS Command Line Interface (CLI). Authenticated users can even inject their own custom code via REST calls or the CLI.

To enable interdisciplinary science, OceanWorks provides access to a rich collection of multivariate satellite and in situ measurements of the oceans (e.g., sea surface temperature, height and salinity, chlorophyll and circulation) and other Earth science data (e.g., aerosol optical depth and wind speed), coupled with on-demand processing capabilities close to the data. We partition the data across space or time into tiles and store them into cloud-aware databases that are collocated with the computations. We will provide examples of scientific studies directly enabled by OceanWorks' multivariate data and cloud analytics.
 
  Address  
  Corporate Author Thesis  
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  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN ISBN Medium  
  Area Expedition Conference  
  Funding Approved $loc['no']  
  Call Number COAPS @ user @ Serial 1005  
Permanent link to this record
 

 
Author Jeon, C.-H.; Buijsman, M.C.; Wallcraft, A.J.; Shriver, J.F.; Arbic, B.K.; Richman, J.G.; Hogan, P.J. url  doi
openurl 
  Title Improving surface tidal accuracy through two-way nesting in a global ocean model Type $loc['typeJournal Article']
  Year Publication Ocean Modelling Abbreviated Journal Ocean Modelling  
  Volume Issue Pages  
  Keywords  
  Abstract  
  Address  
  Corporate Author Thesis  
  Publisher Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 1463-5003 ISBN Medium  
  Area Expedition Conference  
  Funding Approved $loc['no']  
  Call Number COAPS @ user @ Serial 1035  
Permanent link to this record
 

 
Author Jeon, C.-H.; Buijsman, M.C.; Wallcraft, A.J.; Shriver, J.F.; Arbic, B.K.; Richman, J.G.; Hogan, P.J. url  doi
openurl 
  Title Improving surface tidal accuracy through two-way nesting in a global ocean model Type $loc['typeJournal Article']
  Year 2019 Publication Ocean Modelling Abbreviated Journal Ocean Modelling  
  Volume 137 Issue Pages 98-113  
  Keywords Two-way nesting; HYCOM; Barotropic tides; OASIS3-MCT; FES2014; TPXO9-atlas  
  Abstract In global ocean simulations, forward (non-data-assimilative) tide models generally feature large sea-surface-height errors near Hudson Strait in the North Atlantic Ocean with respect to altimetry-constrained tidal solutions. These errors may be associated with tidal resonances that are not well resolved by the complex coastal-shelf bathymetry in low-resolution simulations. An online two-way nesting framework has been implemented to improve global surface tides in the HYbrid Coordinate Ocean Model (HYCOM). In this framework, a high-resolution child domain, covering Hudson Strait, is coupled with a relatively low-resolution parent domain for computational efficiency. Data such as barotropic pressure and velocity are exchanged between the child and parent domains with the external coupler OASIS3-MCT. The developed nesting framework is validated with semi-idealized basin-scale model simulations. The M2 sea-surface heights show very good accuracy in the one-way and two-way nesting simulations in Hudson Strait, where large tidal elevations are observed. In addition, the mass and tidal energy flux are not adversely impacted at the nesting boundaries in the semi-idealized simulations. In a next step, the nesting framework is applied to a realistic global tide simulation. In this simulation, the resolution of the child domain (1/75°) is three times as fine as that of the parent domain (1/25°). The M2 sea-surface-height root-mean-square errors with tide gauge data and the altimetry-constrained global FES2014 and TPXO9-atlas tidal solutions are evaluated for the nesting and no-nesting solutions. The better resolved coastal bathymetry and the finer grid in the child domain improve the local tides in Hudson Strait and Bay, and the back-effect of the coastal tides induces an improvement of the barotropic tides in the open ocean of the Atlantic.  
  Address  
  Corporate Author Thesis  
  Publisher Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 1463-5003 ISBN Medium  
  Area Expedition Conference  
  Funding Approved $loc['no']  
  Call Number COAPS @ user @ Serial 1034  
Permanent link to this record
 

 
Author Jeon, C.-H.; Buijsman, M.C.; Wallcraft, A.J.; Shriver, J.F.; Arbic, B.K.; Richman, J.G.; Hogan, P.J. url  openurl
  Title Improving surface tidal accuracy through two-way nesting in a global ocean model Type $loc['typeJournal Article']
  Year 2019 Publication Ocean Modelling Abbreviated Journal Ocean Modelling  
  Volume 137 Issue Pages 98-113  
  Keywords Two-way nesting; HYCOM; Barotropic tides; OASIS3-MCT; FES2014; TPXO9-atlas  
  Abstract In global ocean simulations, forward (non-data-assimilative) tide models generally feature large sea-surface-height errors near Hudson Strait in the North Atlantic Ocean with respect to altimetry-constrained tidal solutions. These errors may be associated with tidal resonances that are not well resolved by the complex coastal-shelf bathymetry in low-resolution simulations. An online two-way nesting framework has been implemented to improve global surface tides in the HYbrid Coordinate Ocean Model (HYCOM). In this framework, a high-resolution child domain, covering Hudson Strait, is coupled with a relatively low-resolution parent domain for computational efficiency. Data such as barotropic pressure and velocity are exchanged between the child and parent domains with the external coupler OASIS3-MCT. The developed nesting framework is validated with semi-idealized basin-scale model simulations. The M2 sea-surface heights show very good accuracy in the one-way and two-way nesting simulations in Hudson Strait, where large tidal elevations are observed. In addition, the mass and tidal energy flux are not adversely impacted at the nesting boundaries in the semi-idealized simulations. In a next step, the nesting framework is applied to a realistic global tide simulation. In this simulation, the resolution of the child domain (1/75°) is three times as fine as that of the parent domain (1/25°). The M2 sea-surface-height root-mean-square errors with tide gauge data and the altimetry-constrained global FES2014 and TPXO9-atlas tidal solutions are evaluated for the nesting and no-nesting solutions. The better resolved coastal bathymetry and the finer grid in the child domain improve the local tides in Hudson Strait and Bay, and the back-effect of the coastal tides induces an improvement of the barotropic tides in the open ocean of the Atlantic.  
  Address  
  Corporate Author Thesis  
  Publisher Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN ISBN Medium  
  Area Expedition Conference  
  Funding Approved $loc['no']  
  Call Number COAPS @ user @ Serial 1036  
Permanent link to this record
 

 
Author Karmakar, N.; Misra, V. url  doi
openurl 
  Title Differences in Northward Propagation of Convection Over the Arabian Sea and Bay of Bengal During Boreal Summer Type $loc['typeJournal Article']
  Year 2019 Publication Journal of Geophysical Research: Atmospheres Abbreviated Journal J. Geophys. Res. Atmos.  
  Volume 125 Issue 3 Pages  
  Keywords  
  Abstract The governing dynamics that modulate the propagation characteristics of intraseasonal oscillations (ISO) during summer monsoon over the two ocean basins, Bay of Bengal (BoB) and Arabian Sea (AS), are investigated using observational analysis and high‐resolution regional coupled ocean‐atmosphere climate model simulations. ISO features are extracted over the Indian region using a data‐adaptive spectral method called multichannel singular spectrum analysis. ISO exhibits stronger intensity over the BoB than over the AS. But ISO‐filtered rainfall propagates at a faster rate ( urn:x-wiley:jgrd:media:jgrd55983:jgrd55983-math-00011.25°/day) over AS as compared to BoB ( urn:x-wiley:jgrd:media:jgrd55983:jgrd55983-math-0002.74°/day), giving rise to a northwest‐southeast tilted band of rainfall anomalies. However, the composite diagrams of several atmospheric fields associated with northward propagation like vorticity, low‐level convergence, and oceanic variables like sea surface temperature and mixed layer depth do not show this difference in propagation speed and all exhibit a speed of nearly 0.75°/day in both the ocean basins. The difference in speed of ISO‐filtered rainfall is explained through moisture flux convergence. Anomalous horizontal moisture advection plays a major role over AS in preconditioning the atmosphere and making it favorable for convection. Anomalous wind acting on climatological moisture gradient is the dominant term in the moisture advection equation. Easterly wind anomalies associated with a low‐level anticyclone over India helps advect moisture from the eastern side of the domain. The northwest‐southeast tilt of ISO is dictated by the atmospheric processes of moisture advection with the upper ocean playing a more passive role in causing the tilt.  
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  Corporate Author Thesis  
  Publisher Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 2169-897X ISBN Medium  
  Area Expedition Conference  
  Funding Approved $loc['no']  
  Call Number COAPS @ user @ Serial 1099  
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Author Karmakar, N.; Misra, V. url  doi
openurl 
  Title The Relation of Intraseasonal Variations With Local Onset and Demise of the Indian Summer Monsoon Type $loc['typeJournal Article']
  Year 2019 Publication Journal of Geophysical Research: Atmospheres Abbreviated Journal J. Geophys. Res. Atmos.  
  Volume 124 Issue 5 Pages 2483-2506  
  Keywords hydroclimatic, Indian Summer Monsoon, Intraseasonal Oscillations, eastern Indiawestward propagating  
  Abstract Two of the most important hydroclimatic features of the Indian Summer Monsoon (ISM) rainfall are its onset/demise and Intraseasonal Oscillations (ISOs) manifested by the active‐break cycles. In this study, we aim to understand the quantitative association between these two phenomena. An objective definition of local onset/demise of the ISM based on more than a century‐long India Meteorological Department (IMD) rain‐gauge observation is taken into consideration. Using multichannel singular spectrum analysis (MSSA) we isolate northward propagating low‐ (20–60 days; LF‐ISO) and northwestward propagating high‐ (10–20 days; HF‐ISO) frequency ISOs from the daily ISM rainfall. Our results suggest that a large number of local onset (59%) and demise (62%) events occur during positive developing phases and positive decaying phases of two ISOs, respectively, with phase‐locking between LF‐ISO and HF‐ISO being particularly important. Local onset is largely associated with favorable phases of ISOs across India except for LF‐ISO over eastern India and HF‐ISO over western Ghats and central India (CI). We find that local demise is more coherent with the ISO phases, especially with HF‐ISO across the domain. We performed a case study to understand large‐scale association with the onset of the ISM over CI. In 44 of total 58 cases (1948–2005), when CI onset occurred during favorable LF‐ISO or HF‐ISO phase, they are either linked with a northward propagation of convection from the equator in LF‐ISO timescale (28 cases) or westward propagating structures from the western Pacific in HF‐ISO timescale (27 cases).  
  Address  
  Corporate Author Thesis  
  Publisher Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 2169-897X ISBN Medium  
  Area Expedition Conference  
  Funding Approved $loc['no']  
  Call Number COAPS @ user @ Serial 1014  
Permanent link to this record
 

 
Author Kelly, T. B. openurl 
  Title Spatial and interannual variability in export efficiency and the biological pump in an eastern boundary current upwelling system with substantial lateral advection Type $loc['typeManuscript']
  Year 2018 Publication Abbreviated Journal  
  Volume Issue Pages  
  Keywords  
  Abstract  
  Address Department of Earth Ocean and Atmospheric Science  
  Corporate Author Thesis $loc['Master's thesis']  
  Publisher Florida State University Place of Publication Tallahassee, FL Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN ISBN Medium  
  Area Expedition Conference  
  Funding Approved $loc['no']  
  Call Number COAPS @ mfield @ Serial 944  
Permanent link to this record
 

 
Author Kelly, T.B.; Davison, P.C.; Goericke, R.; Landry, M.R.; Ohman, M.D.; Stukel, M,R. doi  openurl
  Title The Importance of Mesozooplankton Diel Vertical Migration for Sustaining a Mesopelagic Food Web Type $loc['typeJournal Article']
  Year 2019 Publication FRONTIERS IN MARINE SCIENCE Abbreviated Journal  
  Volume 6 Issue Pages  
  Keywords  
  Abstract We used extensive ecological and biogeochemical measurements obtained from quasi-Lagrangian experiments during two California Current Ecosystem Long-Term Ecosystem Research cruises to analyze carbon fluxes between the epipelagic and mesopelagic zones using a linear inverse ecosystem model (LIEM). Measurement constraints on the model include C-14 primary productivity, dilution-based microzooplankton grazing rates, gut pigment-based mesozooplankton grazing rates (on multiple zooplankton size classes), Th-234:U-238 disequilibrium and sediment trap measured carbon export, and metabolic requirements of micronekton, zooplankton, and bacteria. A likelihood approach (Markov Chain Monte Carlo) was used to estimate the resulting flow uncertainties from a sample of potential flux networks. Results highlight the importance of mesozooplankton active transport (i.e., diel vertical migration) in supplying the carbon demand of mesopelagic organisms and sequestering carbon dioxide from the atmosphere. In nine water parcels ranging from a coastal bloom to offshore oligotrophic conditions, mesozooplankton active transport accounted for 18-84% (median: 42%) of the total carbon transfer to the mesopelagic, with gravitational settling of POC (12-55%; median: 37%), and subduction (2-32%; median: 14%) providing the majority of the remainder. Vertically migrating zooplankton contributed to downward carbon flux through respiration and excretion at depth and via mortality losses to predatory zooplankton and mesopelagic fish (e.g., myctophids and gonostomatids). Sensitivity analyses showed that the results of the LIEM were robust to changes in nekton metabolic demand, rates of bacterial production, and mesozooplankton gross growth efficiency. This analysis suggests that prior estimates of zooplankton active transport based on conservative estimates of standard (rather than active) metabolism are likely too low.  
  Address  
  Corporate Author Thesis  
  Publisher Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN ISBN Medium  
  Area Expedition Conference  
  Funding Approved $loc['no']  
  Call Number COAPS @ user @ Serial 1084  
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